Nov 14th, 2017 Ontology Working Group Meeting: Difference between revisions
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=Agenda and Notes= | =Agenda and Notes= | ||
* Update on Changes to PECO | |||
* Presentation of PhenoArche data management by INRA: Francois and Pascal are fully booked before end of the year so they propose the following dates: | |||
23, 25 janvier et 6 février. | |||
* EA and MAL may be in Peru during the week - Lima is on eastern time zone | |||
* Request for Revisions to aroma TO:0000087 (#424) From PJ | |||
** http://browser.planteome.org/amigo/term/TO:0000087 | |||
* Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains. | |||
** Currently aroma (TO:0000087) has dual parentage: | |||
** is_a fruit flavor trait (TO:0002694) | |||
** is_a seed composition quality trait (TO:0000488) | |||
*** ''This structure makes no sense.'' | |||
Proposed | |||
Rename grain aroma trait (TO:0000087) | |||
Move to be is_a grain quality trait TO:0000162 | |||
Make it part_of: | |||
fruit flavor trait (TO:0002694) | |||
Comment from PJ: | |||
Needs repositions as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma. | |||
Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma | |||
December Release | |||
Food Ontology meeting: | |||
Involvement of industry and tech, informatics | |||
Full spectrum of production | |||
Agvoice company Bruce Rasa http://www.agvoiceglobal.com/ | |||
Alexa technology, | |||
Food processing traits | |||
Organoleptic traits | |||
Integrate into TO at a high level? | |||
Next IC Foods meeting in March in Dublin, Ireland | |||
http://foodontology.github.io/foodon/ | |||
https://github.com/FoodOntology/foodon | |||
Ask Matthew lange about coming to future meeting | |||
Phenoharmonis planned for mid-May 2018 | |||
Revision as of 20:25, 10 February 2018
- Date: Tuesday Nov 14th, 2017
- Time: 8:15am PST (GMT-8)
- Connection details:
Topic: Planteome Ontology Working Group Meeting Time: Nov 14, 2017 8:15 AM PST
Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/324208533
- Meeting Recordings:
Agenda and Notes
- Update on Changes to PECO
- Presentation of PhenoArche data management by INRA: Francois and Pascal are fully booked before end of the year so they propose the following dates:
23, 25 janvier et 6 février.
- EA and MAL may be in Peru during the week - Lima is on eastern time zone
- Request for Revisions to aroma TO:0000087 (#424) From PJ
- Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains.
- Currently aroma (TO:0000087) has dual parentage:
- is_a fruit flavor trait (TO:0002694)
- is_a seed composition quality trait (TO:0000488)
- This structure makes no sense.
Proposed
Rename grain aroma trait (TO:0000087)
Move to be is_a grain quality trait TO:0000162
Make it part_of: fruit flavor trait (TO:0002694)
Comment from PJ: Needs repositions as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma.
Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma
December Release
Food Ontology meeting: Involvement of industry and tech, informatics
Full spectrum of production
Agvoice company Bruce Rasa http://www.agvoiceglobal.com/ Alexa technology,
Food processing traits
Organoleptic traits Integrate into TO at a high level?
Next IC Foods meeting in March in Dublin, Ireland
http://foodontology.github.io/foodon/
https://github.com/FoodOntology/foodon
Ask Matthew lange about coming to future meeting
Phenoharmonis planned for mid-May 2018
Upcoming Events
- Phenoscape Hackathon in Dec- LC and AM will attend
- Plant and Animal Genome meeting January 2018
- Phenoharmonis planned for mid-May 2018
- ICBO 2018- in Corvallis, August 6-10th
Next meeting: Dec 5th