Planteome Ontology Development and Coordination Working Group: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
* CO provides community-specific vocabularies for integration of data annotations | * CO provides community-specific vocabularies for integration of data annotations | ||
2. | 2. Ontology development and serving to users: | ||
* | |||
3. Annotations and linking- vision of how the data is going to be shared | |||
4. Online resources Web services, provide links to databases | |||
Revision as of 19:24, 20 January 2015
Kick Off Meeting: Monday January 5th, 2015
Goal: Discuss the coordination between the NSF Planteome Project and the Crop Ontology. Who: EA, LC and PJ
1. Progress and Updates on the Crop Ontology (http://www.cropontology.org/)
- Annotation of phenotyping data through the IBP (https://www.integratedbreeding.net)
- Ontology manager on https://www.integratedbreeding.net/
- CO traits used to populate
- Agtrials (http://www.agtrials.org/) on CIAT another source
- Involvement of ICRISAT
- Genebank accessions- done at some centers e.g. CP
- Traits may be in common, but also there is variation between crops
- CO provides community-specific vocabularies for integration of data annotations
2. Ontology development and serving to users:
3. Annotations and linking- vision of how the data is going to be shared
4. Online resources Web services, provide links to databases