Planteome Curator workshop Fall 2015: Difference between revisions

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Discussions from 9-15-15 Ontology WG meeting:
Discussions from 9-15-15 Ontology WG meeting:
= Goals of the meeting: Strategic planning, and ontology curation, and Protege training=
= Goals of the meeting: Strategic planning, and ontology curation, and Protege training=
- Can be just for curators without preexisting training
# Strategic Planning- Core Ontology Working Group
- wants a group of ontology developers to meet, and face-to-face 
* Form a strategic plan on how to build each ontology and how they fit together
* Form a strategic plan on how to build each ontology and how they fit together.
 
# Ontology Curation
 
# Protege Training- Lead by Chris Mungall
* Can be just for curators without preexisting training
* Get curators together for some hands-on development
* Get curators together for some hands-on development


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'''* PJ's vision: Distributed ontology development and maintenance'''  
'''* PJ's vision: Distributed ontology development and maintenance'''  
- Ontology Developers- areas of focus- maybe a dedicated group for each crop group?
- Wants a group of ontology developers to meet face-to-face
- Possible Ontology Developers- collaborators to be included:


* Possible collaborators to be included:
* Based on areas of focus- maybe a dedicated group for each crop group?
** legumes- soybean, Medicago, peanut, lentils (?)
** legumes- soybean, Medicago, peanut, lentils (?)
** tubers- cassava, potato
** tubers- cassava, potato
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* Which of the curators from the CO ready to be involved in ontology development??  
* Which of the curators from the CO ready to be involved in ontology development??  


* Logistics: Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
==Logistics:==
* Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
* Dates: October-November- "2-3 days(core), with a few days more for outside ontologists"
* Dates: October-November- "2-3 days(core), with a few days more for outside ontologists"



Revision as of 21:44, 16 September 2015

Discussions from 9-15-15 Ontology WG meeting:

Goals of the meeting: Strategic planning, and ontology curation, and Protege training

  1. Strategic Planning- Core Ontology Working Group
  • Form a strategic plan on how to build each ontology and how they fit together
  1. Ontology Curation
  1. Protege Training- Lead by Chris Mungall
  • Can be just for curators without preexisting training
  • Get curators together for some hands-on development
  • Who should attend: Planteome Ontology team: developers and software team and experts from various crops: e.g. Medicago, soybean, legume

* PJ's vision: Distributed ontology development and maintenance - Wants a group of ontology developers to meet face-to-face - Possible Ontology Developers- collaborators to be included:

  • Based on areas of focus- maybe a dedicated group for each crop group?
    • legumes- soybean, Medicago, peanut, lentils (?)
    • tubers- cassava, potato
    • rice
    • maize
    • wheat
  • Which of the curators from the CO ready to be involved in ontology development??

Logistics:

  • Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
  • Dates: October-November- "2-3 days(core), with a few days more for outside ontologists"
  • Doodle poll will be circulated (LC)

- Barry: "Any 3 days in Nov 3-16 would work (this includes 2 half days for travel), preferred in Nov 4-15"

Dates of OSU Home Games: http://www.osubeavers.com/SportSelect.dbml?SPSID=750125&SPID=127145