Mar 21st, 2017 Ontology Working Group Meeting: Difference between revisions

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==Plans for publications==
==Plans for publications==
http://biorxiv.org/about-biorxiv


Think about putting our whitepapers or docs on ontology development here. They become citable and can be updated.
 
From PJ: Think about putting our whitepapers or docs on ontology development here: http://biorxiv.org/about-biorxiv. They become citable and can be updated.


* CM:   
* CM:   

Revision as of 17:30, 20 March 2017

Planteome Ontology WG Zoom Meeting

  • Date: Tuesday March 21st, 2017
  • Time: 8:15am PST (GMT-8)


  • Attendees:
  • Regrets:
  • Recordings:

Agenda

New inflorescence terms

Revisions to pedicel terms

Plans for publications

From PJ: Think about putting our whitepapers or docs on ontology development here: http://biorxiv.org/about-biorxiv. They become citable and can be updated.

  • CM:
    • design patterns for TO
    • axiomatization of EO
    • Samara, GRIN traits
    • interactions/diseases


DWS: Here are some that NY grouop are working on:

  • PO for Fruit
  • PO for Inflorescence
  • PO for Seed
  • PO for Lenticel and other wound responses

Year Three Goals

Upcoming Meetings and Workshops

Biocuration 2017, March 26-29, 2017

  • Stanford University, Palo Alto, California, United States
  • http://biocuration2017.org
  • Upcoming deadlines:
  • Abstract submission for poster ONLY February 17, 2017
  • Early conference registration February 17, 2017
  • Online conference registration March 10, 2017
    • Submission email: biocuration2017@lists.stanford.edu
  • Biocuration 2017 will bring together hundreds of leading curation scientists, bioinformaticians, and developers from all over the world to discuss their work, promote collaboration and foster a sense of community in this very active and growing area of research.

2017 Gene Ontology Consortium Meeting, June 1-5th, 2017, Corvallis

  • Dates: June 1-5, 2017 (Details)
    • Arrive (May 31) View travel directions
    • GOC meeting (June 1-3)
    • Noctua gene annotation jamboree (June 4)
    • Reactome Pathway curation jamboree (June 5)
    • Depart (June 5 late evening / June 6 anytime)

Plant Biology 2017, June 24th-28th, Honolulu, Hawaii

  • Important deadlines:
  • April 30, 2017: Deadline for early-bird registration rates for Plant Biology 2017 and iMOSS 2017.
  • May 24, 2017: Deadline for submission of abstracts to be included in the online program book and to receive a poster number.
  • May 27, 2017: Deadline for discount hotel rates. (Please note: Our discounted room block may fill up long before this deadline.)
  • June 12, 2017: Final deadline for Plant Biology 2017 abstract submissions.
  • June 12, 2017: Deadline for standard registration rates for Plant Biology 2017 and iMOSS 2017.
  • June 24–28, 2017: Onsite registration during Plant Biology 2017!

XIX International Botanical Congress, July 23-29, 2017, Shenzhen, China

  • Workshop proposal accepted-
  • T5-06:Ontologizing botanical knowledge (two sessions)
    • Organizer: Hong Cui (University of Arizona, USA)
    • James Macklin (Agriculture Agri-Food Canada, Canada)
    • Pankaj Jaiswal (Oregon State University, USA)
  • T5-18: Bioinformatics resources for comparative functional and phylogenetic analysis of plant genomes, pathways and diversity
    • Organizer: Pankaj Jaiswal (Oregon State University, USA)
    • Sushma Naithani (Oregon State University, USA)
  • Deadline for the abstract submission for oral presentations has been extended for 39 of the 212 general symposia where one or a few speaker slots are available
  • New deadline: February 15, 2017 for those 39 symposia and for posters only
  • Abstract submitted? Not yet


ICBO 2017, Sept 12th-15th, 2017

  • Newcastle, GB
  • http://icbo.buffalo.edu/
  • Important dates:
    • Mar 29, 2017: Workshops and tutorials proposals submission deadline
    • Apr 19, 2017: Notification of acceptance of workshops and tutorials
    • Jun 02, 2017: Paper and Poster Deadline
    • Jun 16, 2017: Paper Reviews Due