Revision as of 22:42, 16 September 2015

Discussions from 9-15-15 Ontology WG meeting:

Goals of the meeting

Who should attend: Planteome Ontology team: developers and software team and experts from various crops

1. Strategic Planning

Goal: Form a strategic plan on how to build each ontology and how they fit together in the Planteome
Who: Core Ontology Working Group:
- PJ, LC, AM, JE, DWS, CM, BS, EA, MAL, GG, SC

2. GitHub and Protege Training

Lead by Chris Mungall, Marie-Angelique can assist
Goal: Train curators in using the GitHub Repositories and Protege software for ontology curation

Who: Ontology Curators
- Planteome team: LC, AM, MAL, NYBG postdoc?, GG postdoc?, OSU undergrad students- Megan and Ethan
- Which of the CO curators are ready to be involved in ontology development??

3. Ontology Curation and Data Annotation * PJ's vision: Distributed ontology development and maintenance

Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
Dates: October-November- "2-3 days(core), with a few days more for outside ontologists"

Doodle poll will be circulated (LC)
- Barry: "Any 3 days in Nov 3-16 would work (this includes 2 half days for travel), preferred in Nov 4-15"

@@ Line 6: / Line 6: @@
 * Goal: Form a strategic plan on '''how to build each ontology''' and '''how they fit together in the Planteome'''
 * Who: Core Ontology Working Group:
-** PJ, LC, AM, JE, DWS, CM, BS, EA, MAL, GG,
+** PJ, LC, AM, JE, DWS, CM, BS, EA, MAL, GG, SC
 '''2.  GitHub and Protege Training'''
@@ Line 23: / Line 23: @@
 * Possible Ontology Developers- collaborators to be included based on areas of focus- maybe a dedicated group for each crop group?
 ** legumes- soybean, Medicago, peanut, lentils (?)
+*** Rex Nelson, "peanut guy"
 ** tubers- cassava, potato
 ** rice