Oct 20th, 2015 Ontology Working Group Meeting

Planteome Ontology WG Zoom Meeting

• Time: Oct 20, 2015 8:15 AM (GMT-7:00) Pacific Time (US and Canada)

Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/592326941

Connection details: Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/592326941

Who: LC, AM, CM, PJ, JE, EA, MAL

Regrets:

• Link to recording- Video: tba
• Link to recording- Audio: tba

Planteome workshop Nov 9-13th,

• Location: Oregon State University, Corvallis, 2nd week of Nov
• For more details- please see the notes are on the wiki- Planteome_Curator_workshop_Fall_2015

Plant Ontology Release #21

- Many changes and updates to the PO

• Transition to GitHub complete, and working well- required many updated Xrefs and links in the various browsers, ontology files and pages.
• PO Live Browser updated for the transition to GitHub with links to the new Issue Tracker and association repository on the SVN-
• For more information: Plant_Ontology_Release_#21

• New association data developed from the [1] paper published in Feb 2015: http://www.plantmethods.com/content/11/1/10/abstract
  • Six plant species: Rice, Maize, Arabidopsis, soybean, Medicago, tomato ~ 4,193 new direct associations

Discussion about Plant Trait Ontology

See notes on: Sept_15th,_2015-_Ontology_Working_Group_Meeting#3._Plant_Trait_Ontology

Update from DWS- NYBG

http://www.wiley.com/WileyCDA/WileyTitle/productCd-EHEP001000.html

Transition to AmiGO2- Status report

• Link to Dev.Planteome site

• Link to Issue Tracker on GitHub: [2]

• Working on getting AmiGO instances up for live site (and second dev site for Data Visualization group). Waiting for Chris Sullivan to okay changes to server.

PAG 2016: Systems Biology and Ontologies Workshop

• Saturday Jan 9th, 8 am
• Link to PAG webpage: Systems Biology and Ontologies

ICBO Conference Planning

Conference webpage: ICBO 2016