Nov 14th, 2017 Ontology Working Group Meeting
- Date: Tuesday Nov 14th, 2017
- Time: 8:15am PST (GMT-8)
- Connection details:
Topic: Planteome Ontology Working Group Meeting Time: Nov 14, 2017 8:15 AM PST
Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/324208533
- Meeting Recordings:
Agenda and Notes
- Update on Changes to PECO- in progress
Presentation of PhenoArche data management by INRA
- Francois and Pascal are fully booked before end of the year so they propose the following dates: 23, 25 janvier et 6 février.
- EA and MAL may be in Peru during the week - Lima is on eastern time zone
Request for Revisions to aroma TO:0000087
- From PJ; See tracker (#424)
- Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains.
- aroma (TO:0000087) has dual parentage:
- is_a fruit flavor trait (TO:0002694)
- is_a seed composition quality trait (TO:0000488)
- This structure makes no sense.
- Proposed
- Rename grain aroma trait (TO:0000087)- done
- Move to be is_a grain quality trait TO:0000162 - done
- Make it part_of: fruit flavor trait (TO:0002694) - done
- Comment from PJ: Needs repositioned as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma.
- Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma
- Aroma grouping term?, where to put it?
- don't have to assert the aroma parent- since it will have the EA, it will be aroma inheres_in grain
- Aroma is a physical object quality in PATO- PATO:0000058
Next Release
- Try for December befoer PAG
Food Ontology meeting
- Involvement of industry and tech, informatics
- Full spectrum of production
- Agvoice company Bruce Rasa http://www.agvoiceglobal.com/- Alexa technology,
- Food processing traits
- Organoleptic traits- Integrate into TO at a high level?
- Next IC Foods meeting in March in Dublin, Ireland
- Ask Matthew Lange about coming to future meeting
- Phenoharmonis planned for mid-May 2018
Upcoming Events
- Phenoscape Hackathon in Dec- LC and AM will attend
- Plant and Animal Genome meeting January 2018
- Phenoharmonis planned for mid-May 2018
- ICBO 2018- in Corvallis, August 6-10th
Next meeting: Dec 5th