Mar 14th, 2017 Ontology Working Group Meeting

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Planteome Ontology WG Zoom Meeting

  • Date: Tuesday March 14th, 2017
  • Time: 8:15am PST (GMT-8)
  • Connection details:

Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/370267127

  • Attendees:
  • Regrets: GG
  • Recordings:

Agenda

Revisions to inflorescence branch terms & axis terms

  • Propose that inflorescence branch (PO:0009081) be renamed higher order inflorescence axis, and that each order of inflorescence branch be renamed using its corresponding inflorescence axis exact synonym; for example, third order inflorescence branch would be renamed its current synonym, fourth order inflorescence axis.

Link to google doc: https://docs.google.com/document/d/14taS42nD6tucMIWAe2MrQLlAx_HAskuLp9TevsSOKFU/edit?usp=sharing

Link to tracker: https://github.com/Planteome/plant-ontology/issues/667


Year Three Goals

https://docs.google.com/document/d/10IsjeG8vew62apsM16J4YsoYI5IsBphPrT75CqOtDco/edit?usp=sharing

Upcoming Meetings and Workshops

Biocuration 2017, March 26-29, 2017

  • Stanford University, Palo Alto, California, United States
  • http://biocuration2017.org
  • Upcoming deadlines:
  • Abstract submission for poster ONLY February 17, 2017
  • Early conference registration February 17, 2017
  • Online conference registration March 10, 2017
    • Submission email: biocuration2017@lists.stanford.edu
  • Biocuration 2017 will bring together hundreds of leading curation scientists, bioinformaticians, and developers from all over the world to discuss their work, promote collaboration and foster a sense of community in this very active and growing area of research.

2017 Gene Ontology Consortium Meeting, June 1-5th, 2017, Corvallis

  • Dates: June 1-5, 2017 (Details)
    • Arrive (May 31) View travel directions
    • GOC meeting (June 1-3)
    • Noctua gene annotation jamboree (June 4)
    • Reactome Pathway curation jamboree (June 5)
    • Depart (June 5 late evening / June 6 anytime)

XIX International Botanical Congress, July 23-29, 2017, Shenzhen, China

  • Workshop proposal accepted-
  • T5-06:Ontologizing botanical knowledge (two sessions)
    • Organizer: Hong Cui (University of Arizona, USA)
    • James Macklin (Agriculture Agri-Food Canada, Canada)
    • Pankaj Jaiswal (Oregon State University, USA)
  • T5-18: Bioinformatics resources for comparative functional and phylogenetic analysis of plant genomes, pathways and diversity
    • Organizer: Pankaj Jaiswal (Oregon State University, USA)
    • Sushma Naithani (Oregon State University, USA)
  • Deadline for the abstract submission for oral presentations has been extended for 39 of the 212 general symposia where one or a few speaker slots are available
  • New deadline: February 15, 2017 for those 39 symposia and for posters only
  • Abstract submitted? Not yet


ICBO 2017, Sept 12th-15th, 2017

  • Newcastle, GB
  • http://icbo.buffalo.edu/
  • Important dates:
    • Mar 29, 2017: Workshops and tutorials proposals submission deadline
    • Apr 19, 2017: Notification of acceptance of workshops and tutorials
    • Jun 02, 2017: Paper and Poster Deadline
    • Jun 16, 2017: Paper Reviews Due
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