Nov 14th, 2017 Ontology Working Group Meeting: Difference between revisions
Jump to navigation
Jump to search
| Line 12: | Line 12: | ||
=Agenda and Notes= | =Agenda and Notes= | ||
* Update on Changes to PECO | * Update on Changes to PECO- ''in progress'' | ||
==Presentation of PhenoArche data management by INRA== | |||
* Francois and Pascal are fully booked before end of the year so they propose the following dates: 23, 25 janvier et 6 février. | |||
* EA and MAL may be in Peru during the week - Lima is on eastern time zone | * EA and MAL may be in Peru during the week - Lima is on eastern time zone | ||
== Request for Revisions to aroma TO:0000087== | |||
* | * From PJ; See tracker ([https://github.com/Planteome/plant-trait-ontology/issues/424 #424]) | ||
* Current definition: aroma ([http://dev.planteome.org/amigo/term/TO:0000087 TO:0000087]): The aroma of the cooked/uncooked grains. | |||
* | * aroma (TO:0000087) has dual parentage: | ||
** is_a fruit flavor trait (TO:0002694) | ** is_a fruit flavor trait (TO:0002694) | ||
** is_a seed composition quality trait (TO:0000488) | ** is_a seed composition quality trait (TO:0000488) | ||
*** ''This structure makes no sense.'' | *** ''This structure makes no sense.'' | ||
* Proposed | |||
** Rename grain aroma trait (TO:0000087) | |||
** Move to be is_a grain quality trait TO:0000162 | |||
** Make it part_of: fruit flavor trait (TO:0002694) | |||
* Comment from PJ: Needs repositioned as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma. | |||
* Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma | |||
Comment from PJ: | |||
Needs | |||
Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma | |||
Revision as of 20:30, 10 February 2018
- Date: Tuesday Nov 14th, 2017
- Time: 8:15am PST (GMT-8)
- Connection details:
Topic: Planteome Ontology Working Group Meeting Time: Nov 14, 2017 8:15 AM PST
Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/324208533
- Meeting Recordings:
Agenda and Notes
- Update on Changes to PECO- in progress
Presentation of PhenoArche data management by INRA
- Francois and Pascal are fully booked before end of the year so they propose the following dates: 23, 25 janvier et 6 février.
- EA and MAL may be in Peru during the week - Lima is on eastern time zone
Request for Revisions to aroma TO:0000087
- From PJ; See tracker (#424)
- Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains.
- aroma (TO:0000087) has dual parentage:
- is_a fruit flavor trait (TO:0002694)
- is_a seed composition quality trait (TO:0000488)
- This structure makes no sense.
- Proposed
- Rename grain aroma trait (TO:0000087)
- Move to be is_a grain quality trait TO:0000162
- Make it part_of: fruit flavor trait (TO:0002694)
- Comment from PJ: Needs repositioned as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma.
- Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma
December Release
Food Ontology meeting: Involvement of industry and tech, informatics
Full spectrum of production
Agvoice company Bruce Rasa http://www.agvoiceglobal.com/ Alexa technology,
Food processing traits
Organoleptic traits Integrate into TO at a high level?
Next IC Foods meeting in March in Dublin, Ireland
http://foodontology.github.io/foodon/
https://github.com/FoodOntology/foodon
Ask Matthew lange about coming to future meeting
Phenoharmonis planned for mid-May 2018
Upcoming Events
- Phenoscape Hackathon in Dec- LC and AM will attend
- Plant and Animal Genome meeting January 2018
- Phenoharmonis planned for mid-May 2018
- ICBO 2018- in Corvallis, August 6-10th
Next meeting: Dec 5th