Nov 14th, 2017 Ontology Working Group Meeting: Difference between revisions

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=Agenda and Notes=   
=Agenda and Notes=   
==News:==
* Update on Changes to PECO
 
* Presentation of PhenoArche data management by INRA: Francois and Pascal are fully booked before end of the year so they propose the following dates:
23, 25 janvier et 6 février.
* EA and MAL may be in Peru during the week - Lima is on eastern time zone
 
* Request for Revisions to aroma TO:0000087 (#424) From PJ
** http://browser.planteome.org/amigo/term/TO:0000087
* Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains.
** Currently aroma (TO:0000087) has dual parentage:
** is_a fruit flavor trait (TO:0002694)
** is_a seed composition quality trait (TO:0000488)
*** ''This structure makes no sense.'' 
 
 
Proposed
Rename grain aroma trait (TO:0000087)
Move to be is_a grain quality trait TO:0000162
 
Make it part_of:
fruit flavor trait (TO:0002694)
 
Comment from PJ:
Needs repositions as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma.
 
Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma
 
 
 
December Release
 
 
 
Food Ontology meeting:
Involvement of industry and tech, informatics
Full spectrum of production
Agvoice company Bruce Rasa http://www.agvoiceglobal.com/
Alexa technology,
 
Food processing traits
 
Organoleptic traits
Integrate into TO at a high level?
 
 
 
Next IC Foods meeting in March in Dublin, Ireland
 
http://foodontology.github.io/foodon/
 
https://github.com/FoodOntology/foodon
 
 
Ask Matthew lange about coming to future meeting
 
Phenoharmonis planned for mid-May 2018
 
 





Revision as of 20:25, 10 February 2018

  • Date: Tuesday Nov 14th, 2017
  • Time: 8:15am PST (GMT-8)
  • Connection details:

Topic: Planteome Ontology Working Group Meeting Time: Nov 14, 2017 8:15 AM PST

Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/324208533

Agenda and Notes

  • Update on Changes to PECO
  • Presentation of PhenoArche data management by INRA: Francois and Pascal are fully booked before end of the year so they propose the following dates:
23, 25 janvier et 6 février.
  • EA and MAL may be in Peru during the week - Lima is on eastern time zone
  • Request for Revisions to aroma TO:0000087 (#424) From PJ
  • Current definition: aroma (TO:0000087): The aroma of the cooked/uncooked grains.
    • Currently aroma (TO:0000087) has dual parentage:
    • is_a fruit flavor trait (TO:0002694)
    • is_a seed composition quality trait (TO:0000488)
      • This structure makes no sense.


Proposed Rename grain aroma trait (TO:0000087) Move to be is_a grain quality trait TO:0000162

Make it part_of: fruit flavor trait (TO:0002694)

Comment from PJ: Needs repositions as IS_A quality trait with two children seed and fruit aroma. with rice scent /aroma being a child of seed aroma.

Since rice grain is a caryopsis fruit (PO:0030104), rice grain aroma would be is_a fruit aroma


December Release


Food Ontology meeting: Involvement of industry and tech, informatics

Full spectrum of production

Agvoice company Bruce Rasa http://www.agvoiceglobal.com/ Alexa technology,

Food processing traits

Organoleptic traits Integrate into TO at a high level?


Next IC Foods meeting in March in Dublin, Ireland

http://foodontology.github.io/foodon/

https://github.com/FoodOntology/foodon


Ask Matthew lange about coming to future meeting

Phenoharmonis planned for mid-May 2018



Upcoming Events

  • Phenoscape Hackathon in Dec- LC and AM will attend
  • Plant and Animal Genome meeting January 2018
  • Phenoharmonis planned for mid-May 2018
  • ICBO 2018- in Corvallis, August 6-10th

Next meeting: Dec 5th