May 9th, 2017 Ontology Working Group Meeting: Difference between revisions

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** [[File:Ontology WG Meeting audio 5-9-17.m4a|thumb|Ontology WG Meeting audio 5-9-17]]
** [[File:Ontology WG Meeting audio 5-9-17.m4a|thumb|Ontology WG Meeting audio 5-9-17]]
** [[File:Ontology WG Meeting video 5-9-17.mp4|thumb|Ontology WG Meeting video 5-9-17]]
** [[File:Ontology WG Meeting video 5-9-17.mp4|thumb|Ontology WG Meeting video 5-9-17]]
** http://wiki.planteome.org/index.php/File:Ontology_WG_Meeting_video_5-9-17.mp4
 


=Agenda=
=Agenda=
==Planteome Noctua==
==Updates from NYBG==
* In preparation for the Noctua workshop on June 4th, we will review the current version of the Planteome Noctua and test out features and functionalities.
* Brandon will be leaving project as of May 19th, and Dario will be leaving on May 12th.
* Demo and test of Planteome Noctua instance: '''http://noctua-dev.planteome.org/'''
* DWS out till May 15th
** Link to [https://docs.google.com/document/d/1KYi1f53KCmPsLDBnz8fIosg4htkPoEHjeXZtj-QedgM/edit?usp=sharing Planteome Noctua SOP] (In progress)
** Revisions to spikelet pedicel (document: [https://docs.google.com/document/d/1GeMKf0s-M58355hakqeN7Aaf72kHvGaTubfwOh9Pf9o/edit?usp=sharing Pedicel and Related Terms]


* Items mentioned during call:
** TBA...


==Updates==
* Updates from NYBG:
** Brandon will be leaving project as of May 19th, and Dario will be leaving on May 12th. 
**


* Progress on the Agro Ontology- (MAL)
==Ontology of Plant Stress (AM)==
*  
==Progress on the Agro Ontology- (MAL)==


* Ontology of Plant Stress (AM)


== Current work going on in PO==
Link to pedicel document: https://docs.google.com/document/d/1GeMKf0s-M58355hakqeN7Aaf72kHvGaTubfwOh9Pf9o/edit?usp=sharing


= Upcoming Meetings and Workshops=
= Upcoming Meetings and Workshops=

Revision as of 19:13, 9 May 2017

Planteome Ontology WG Zoom Meeting

  • Date: Tuesday May 9th, 2017
  • Time: 8:15am PDT (GMT-7)


Agenda

Updates from NYBG

  • Brandon will be leaving project as of May 19th, and Dario will be leaving on May 12th.
  • DWS out till May 15th


Ontology of Plant Stress (AM)

Progress on the Agro Ontology- (MAL)

Upcoming Meetings and Workshops

2017 Gene Ontology Consortium Meeting, June 1-5th, 2017, Corvallis

  • Dates: June 1-5, 2017 (Details)
    • Arrive (May 31) View travel directions
    • GOC meeting (June 1-3)
    • Noctua gene annotation jamboree (June 4)
    • Reactome Pathway curation jamboree (June 5)
    • Depart (June 5 late evening / June 6 anytime)

Plant Biology 2017, June 24th-28th, Honolulu, Hawaii

  • Important deadlines:
    • May 24, 2017: Deadline for submission of abstracts to be included in the online program book and to receive a poster number.
    • May 27, 2017: Deadline for discount hotel rates. (Please note: Our discounted room block may fill up long before this deadline.)
    • June 12, 2017: Final deadline for Plant Biology 2017 abstract submissions.
    • June 12, 2017: Deadline for standard registration rates for Plant Biology 2017 and iMOSS 2017.
    • June 24–28, 2017: Onsite registration during Plant Biology 2017!

XIX International Botanical Congress, July 23-29, 2017, Shenzhen, China

  • Workshop proposal accepted-
  • T5-06:Ontologizing botanical knowledge (two sessions)
    • Organizer: Hong Cui (University of Arizona, USA)
    • James Macklin (Agriculture Agri-Food Canada, Canada)
    • Pankaj Jaiswal (Oregon State University, USA)
  • T5-18: Bioinformatics resources for comparative functional and phylogenetic analysis of plant genomes, pathways and diversity
    • Organizer: Pankaj Jaiswal (Oregon State University, USA)
    • Sushma Naithani (Oregon State University, USA)
  • Deadline for the abstract submission for oral presentations has been extended for 39 of the 212 general symposia where one or a few speaker slots are available
  • New deadline: February 15, 2017 for those 39 symposia and for posters only
  • Abstract submitted?

ICBO 2017, Sept 12th-15th, 2017

  • Newcastle, GB
  • http://icbo.buffalo.edu/
  • Important dates:
    • Mar 29, 2017: Workshops and tutorials proposals submission deadline
    • Apr 19, 2017: Notification of acceptance of workshops and tutorials
    • Jun 02, 2017: Paper and Poster Deadline
    • Jun 16, 2017: Paper Reviews Due
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