Revision as of 01:01, 4 February 2016

Planteome Ontology WG Zoom Meeting

Date: Tuesday Feb 4th, 2016
Time: 8:15am PST (GMT-8)
Connection details: Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/626362406

Revisions to the upper-level categories of the biochemical trait TO:0000277 branch of the TO:

Current structure of the branch:

Goals: Align and define each of the biochemical-related trait classes to either GO or ChEBI classes.

biochemical trait TO:0000277

Current def’n: The traits associated with assay of either of the effected metabolite profile, enzymatic activity and biological processes which includes the physiological processes.
- propose revised def’n: A plant trait (TO:0000387) which is a quality of a molecular function (GO:0003674), a plant metabolite (CHEBI:76924), or a chemical entity (CHEBI:24431), that is part of, or has participant a cellular component (GO:0005575), plant anatomical entity (PO:0025131) and/or a plant structure development stage (PO:0009012).

Note: this def’n is based on the biological process (GO:0008150) terms moving to a new branch of their own.

Phenotype RCN meeting Feb 2016
Biocuration 2016 (https://www.isb-sib.ch/events/biocuration2016/home)
GARNet/Egenis Workshop: Integrating Large Data into Plant Science
- April 21st-22nd 2016 (Link)
Meeting in Montpellier, May 2016
Intelligent Systems for Molecular Biology (ISMB) http://www.iscb.org/ismb2016; BioOntologies SIG
ICBO and Biocreative 2016 Corvallis

@@ Line 16: / Line 16: @@
 [[File:Screen Shot 2016-01-15 at 4.10.18 PM.png]]
-Goals:
+Goals: Align and define each of the biochemical-related trait classes to either GO or ChEBI classes.
@@ Line 31: / Line 30: @@
 Link to tracker: https://github.com/Planteome/plant-trait-ontology/issues/381
+==biological process (GO:0008150)==
 = Upcoming meetings and  workshops=