Dec 8th, 2015 Ontology Working Group Meeting: Difference between revisions

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* Leaflet: http://purl.obolibrary.org/obo/PO_0020049
* Leaflet: http://purl.obolibrary.org/obo/PO_0020049


- DWS recently attended a meeting with folks from Center for Open Science, Univ. of Virginia
- DWS recently attended a meeting with the Center for Open Science, Univ. of Virginia
* making experiments in ecology and psychology, repeatable  
* making experiments repeatable in ecology and psychology, what kind of metadata needs to be captured- using ontologies can help
* Force 11/Force 2016- Open Science Initiative
** e.g.
* BS: developing an ontology for biological and clinical statistics- make pipeline repeatable
* in Evolutionary biology- all the steps are defined and documented
* From BS: Related effort: [https://www.force11.org/ Force 11]/Force 2016- Open Science Initiative (Melissa Haendel, Maryanne Martone)


== Mapping of TO terms to trait dictionaries for lentil, soybean, cassava, rice: Overview of progress ==
== Mapping of TO terms to trait dictionaries for lentil, soybean, cassava, rice: Overview of progress ==

Revision as of 19:44, 8 December 2015

Planteome Ontology WG Zoom Meeting:

Date: Tuesday Dec. 8th, 2015 Time: 8:15am PST (GMT-8)

  • Attendees: LC, AM, PJ, DWS, BS

Updates

-DWS is working on a plant anatomy glossary- images can be linked to the PO terms in the digital version. Main interest in terms for spines, prickles, stipules, LC: should use the purl rather than the PO webpage or planteome page.

- DWS recently attended a meeting with the Center for Open Science, Univ. of Virginia

  • making experiments repeatable in ecology and psychology, what kind of metadata needs to be captured- using ontologies can help
    • e.g.
  • BS: developing an ontology for biological and clinical statistics- make pipeline repeatable
  • in Evolutionary biology- all the steps are defined and documented
  • From BS: Related effort: Force 11/Force 2016- Open Science Initiative (Melissa Haendel, Maryanne Martone)

Mapping of TO terms to trait dictionaries for lentil, soybean, cassava, rice: Overview of progress

From PJ: lentil tendrils image

Discussion about modified variables with scale info

Trait Ontology changes

Planteome Curator Workshop at PAG

Updates and Agenda (PAG 2016 Planteome-CO workshop)


Next Meeting:

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