Jan 21st, 2016 Ontology Working Group Meeting

Planteome Ontology WG Zoom Meeting

• Date: Tuesday Jan. 19th, 2015
• Time: 8:15am PST (GMT-8)
• Connection details: Join from PC, Mac, Linux, iOS or Android: Join from PC, Mac, Linux, iOS or Android: https://zoom.us/j/757453328

• Attendees: TBA

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Report on the PAG Workshop with CG Collaborators Monday Jan 11th

- 29 attendees

Revisions to the biochemical trait TO:0000277 branch of the TO:

Revisions to the upper-level categories

Biochemical branch TO

details tba

content/concentration/amount

Biochemists definitions:

• concentration = amount/ VOLUME

• content = amount/MASS

PATO defs:

• ‘concentration of’ -A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance.

• 'amount' -The number of entities of this type that are part of the whole organism.

-Requested a revision of the 'amount' definition

• The number of entities of this type that are part of another entity.

Options:

• Merge content and concentration terms

• Add new parent term 'amount'. Make content and concentration terms children of this parent (see image)