Planteome Curator workshop Fall 2015 - Revision history

Cooperl: /* Accommodations: */

2015-10-22T20:02:18Z

Accommodations:

← Older revision		Revision as of 20:02, 22 October 2015
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	===Accommodations: ===		===Accommodations: ===
	* On campus housing is available in dorm-style suites at [http://oregonstate.edu/uhds/bloss Bloss Hall] (on-campus)~~, is $38 per night.~~		* On campus housing is available in dorm-style suites at [http://oregonstate.edu/uhds/bloss Bloss Hall] (on-campus)
	* Private room with shared bathroom facility (separate men's and women's).		* Private room with shared bathroom facility (separate men's and women's).

Cooperl: /* Logistics: */

2015-10-22T19:54:46Z

Logistics:

← Older revision		Revision as of 19:54, 22 October 2015
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	* On campus housing is available in dorm-style suites at [http://oregonstate.edu/uhds/bloss Bloss Hall] (on-campus), is $38 per night.		* On campus housing is available in dorm-style suites at [http://oregonstate.edu/uhds/bloss Bloss Hall] (on-campus), is $38 per night.
	* Private room with shared bathroom facility (separate men's and women's).		* Private room with shared bathroom facility (separate men's and women's).


	** Link to more information about the facilities: [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]		** Link to more information about the facilities: [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]

Cooperl: /* Accommodations: */

2015-10-22T19:53:47Z

Accommodations:

← Older revision		Revision as of 19:53, 22 October 2015
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	===Accommodations: ===		===Accommodations: ===
	* On campus housing is available in dorm-style suites at ~~Dixon Lodge~~ (on-campus), is $38 per night. Private room with shared bathroom facility (separate men's and women's).		* On campus housing is available in dorm-style suites at [http://oregonstate.edu/uhds/bloss Bloss Hall] (on-campus), is $38 per night.
			* Private room with shared bathroom facility (separate men's and women's).


	** Link to more information about the facilities: [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]		** Link to more information about the facilities: [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]

	* Link to information about hotels in Corvallis: [http://www.tripadvisor.com/Hotels-g51817-Corvallis_Oregon-Hotels.html Corvallis_Oregon-Hotels].		* Link to information about hotels in Corvallis: [http://www.tripadvisor.com/Hotels-g51817-Corvallis_Oregon-Hotels.html Corvallis_Oregon-Hotels].
	** Closest hotel to campus is the [http://hiltongardeninn3.hilton.com/en/hotels/oregon/hilton-garden-inn-corvallis-CVOCHGI/index.html Hilton Garden Inn]		** Closest hotel to campus is the [http://hiltongardeninn3.hilton.com/en/hotels/oregon/hilton-garden-inn-corvallis-CVOCHGI/index.html Hilton Garden Inn]

	===Other info===		===Other info===
	Dates of OSU Home Games: http://www.osubeavers.com/SportSelect.dbml?SPSID=750125&SPID=127145		Dates of OSU Home Games: http://www.osubeavers.com/SportSelect.dbml?SPSID=750125&SPID=127145

Cooperl: /* Dates: Week of Monday, Nov. 9th to Friday Nov. 13th */

2015-10-20T15:35:51Z

Dates: Week of Monday, Nov. 9th to Friday Nov. 13th

← Older revision		Revision as of 15:35, 20 October 2015
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	* People could arrive Sunday Nov 8th. See below for more info on the logistics		* People could arrive Sunday Nov 8th. See below for more info on the logistics
	* Who should attend? Planteome Ontology team: developers and software team and experts from various crops		* Who should attend? Planteome Ontology team: developers and software team and experts from various crops
	** Barry Smith- (will attend Nov 10th~~-11th???~~)		** Barry Smith- (will attend Nov 9th-10th)
	** Dennis will attend remotely on Mon Nov 9th and Tues Nov 10th		** Dennis will attend remotely on Mon Nov 9th and Tues Nov 10th
	** Chris Mungall and Seth Carbon		** Chris Mungall and Seth Carbon

Cooperl at 19:04, 13 October 2015

2015-10-13T19:04:05Z

← Older revision		Revision as of 19:04, 13 October 2015
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	= Note: This page is under development, so check back frequently=		= Note: This page is under development, so check back frequently=

			See link to [http://planteome.org/curation_workshop_2015 Planteome Curation Workshop Webpage]

	== Dates: Week of Monday, Nov. 9th to Friday Nov. 13th==		== Dates: Week of Monday, Nov. 9th to Friday Nov. 13th==

Cooperl: /* Logistics: */

2015-10-13T17:55:43Z

Logistics:

← Older revision		Revision as of 17:55, 13 October 2015
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	==Logistics:==		==Logistics:==
	* ~~Planned to be in~~ Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive		* Location: Oregon State University Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
	** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/		** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/
	* Accommodations:
	** On campus housing may be available in dorm-style suites [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]

	** Link to information about hotels in Corvallis: [http://www.tripadvisor.com/Hotels-g51817-Corvallis_Oregon-Hotels.html Corvallis_Oregon-Hotels].		===Accommodations: ===
			* On campus housing is available in dorm-style suites at Dixon Lodge (on-campus), is $38 per night. Private room with shared bathroom facility (separate men's and women's).
			** Link to more information about the facilities: [http://oregonstate.edu/uhds/scholar-housing Scholar Housing- OSU]

			* Link to information about hotels in Corvallis: [http://www.tripadvisor.com/Hotels-g51817-Corvallis_Oregon-Hotels.html Corvallis_Oregon-Hotels].
	** Closest hotel to campus is the [http://hiltongardeninn3.hilton.com/en/hotels/oregon/hilton-garden-inn-corvallis-CVOCHGI/index.html Hilton Garden Inn]		** Closest hotel to campus is the [http://hiltongardeninn3.hilton.com/en/hotels/oregon/hilton-garden-inn-corvallis-CVOCHGI/index.html Hilton Garden Inn]
			===Other info===
	Dates of OSU Home Games: http://www.osubeavers.com/SportSelect.dbml?SPSID=750125&SPID=127145		Dates of OSU Home Games: http://www.osubeavers.com/SportSelect.dbml?SPSID=750125&SPID=127145

Cooperl: /* Goals and Agenda of the meeting */

2015-10-13T17:48:26Z

Goals and Agenda of the meeting

← Older revision		Revision as of 17:48, 13 October 2015
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	** maize Mary Schaeffer		** maize Mary Schaeffer

	===Logistics:===		==Logistics:==
	* Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive		* Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
	** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/		** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/

Cooperl: /* 3. Ontology Curation and Data Annotation */

2015-10-06T22:26:56Z

3. Ontology Curation and Data Annotation

← Older revision		Revision as of 22:26, 6 October 2015
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	** legumes- soybean, Medicago (Rex Nelson), peanut, lentils (Scott Kalber)		** legumes- soybean, Medicago (Rex Nelson), peanut, lentils (Scott Kalber)
	** tubers- cassava (Afola Agbona, [http://www.iita.org/ IITA]), potato (Reinhard Simon) and sweet potato (Vilma Huela): both from CIP		** tubers- cassava (Afola Agbona, [http://www.iita.org/ IITA]), potato (Reinhard Simon) and sweet potato (Vilma Huela): both from CIP
	** wheat, rice and maize?		** wheat, rice and
			** maize Mary Schaeffer

	===Logistics:===		===Logistics:===

Cooperl: /* Goals and Agenda of the meeting */

2015-10-05T23:11:37Z

Goals and Agenda of the meeting

Cooperl: /* Dates: Week of Monday, Nov. 9th to Friday Nov. 13th */

2015-10-05T23:11:09Z

Dates: Week of Monday, Nov. 9th to Friday Nov. 13th

← Older revision		Revision as of 23:11, 5 October 2015
Line 1:		Line 1:
	= Note: This page is under development, so check back frequently=		= Note: This page is under development, so check back frequently=

	= Dates: Week of Monday, Nov. 9th to Friday Nov. 13th=		== Dates: Week of Monday, Nov. 9th to Friday Nov. 13th==
	* People could arrive Sunday Nov 8th. See below for more info on the logistics		* People could arrive Sunday Nov 8th. See below for more info on the logistics
	* Who should attend? Planteome Ontology team: developers and software team and experts from various crops		* Who should attend? Planteome Ontology team: developers and software team and experts from various crops

← Older revision		Revision as of 23:11, 5 October 2015
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	* Will invite the CO curators who are interested, can have another session at the PAG meeting for those who cannot attend		* Will invite the CO curators who are interested, can have another session at the PAG meeting for those who cannot attend

	= Goals and Agenda of the meeting=		== Goals and Agenda of the meeting==

	== 1. Strategic Planning ==		=== 1. Strategic Planning ===
	* Goal: Form a strategic plan on '''how to build each ontology''' and '''how they fit together in the Planteome'''		* Goal: Form a strategic plan on '''how to build each ontology''' and '''how they fit together in the Planteome'''
	* Who: Core Ontology Working Group:		* Who: Core Ontology Working Group:
	** PJ, LC, AM, JE, DWS, CM, BS, EA, MAL, GG, SC		** PJ, LC, AM, JE, DWS, CM, BS, EA, MAL, GG, SC

	==2. GitHub, TermGenie and Protege Training==		===2. GitHub, TermGenie and Protege Training===
	* Lead by Chris Mungall, Marie-Angelique can assist		* Lead by Chris Mungall, Marie-Angelique can assist
	* Goal: Train curators in using the GitHub Repositories and Protege software for ontology curation - collect their feedback		* Goal: Train curators in using the GitHub Repositories and Protege software for ontology curation - collect their feedback
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	** Any of the CO curators are ready to be involved in ontology development		** Any of the CO curators are ready to be involved in ontology development

	==3. Ontology Curation and Data Annotation==		===3. Ontology Curation and Data Annotation===
	* '''Planteome Vision: Distributed ontology development and maintenance'''		* '''Planteome Vision: Distributed ontology development and maintenance'''
	* Wants a group of ontology developers to meet face-to-face		* Wants a group of ontology developers to meet face-to-face
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	** wheat, rice and maize?		** wheat, rice and maize?

	==Logistics:==		===Logistics:===
	* Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive		* Planned to be in Corvallis- plan to fly into Portland (PDX) ~1.5hrs drive, or Eugene (EUG) ~ 50 mins drive
	** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/		** Hut Shuttle service from Portland Airport: http://www.hutshuttle.com/